Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis acetyltransferase wcaf | C5P43_28665 | Not Available | Positive | 5044683 - 5045231 | 19977.2 |
| gdp-mannose 4,6-dehydratase | C5P43_28670 | Not Available | Positive | 5045257 - 5045929 | 25462.2 |
| ribosomal rna large subunit methyltransferase f | C5P43_28675 | Not Available | Positive | 5045941 - 5046867 | 34181.8 |
| mechanosensitive ion channel protein | C5P43_28680 | Not Available | Negative | 5046864 - 5047585 | 25469.9 |
| ydcf family protein | C5P43_28685 | Not Available | Positive | 5047833 - 5048633 | 29721.4 |
| aldehyde dehydrogenase | C5P43_28690 | Not Available | Positive | 5048830 - 5049240 | 15383.1 |
| ribosomal rna large subunit methyltransferase f | C5P43_28695 | Not Available | Positive | 5049252 - 5050178 | 34181.8 |
| mechanosensitive ion channel protein | C5P43_28700 | Not Available | Negative | 5050175 - 5050893 | 25370.8 |
| duf808 domain-containing protein | C5P43_28705 | Not Available | Negative | 5050903 - 5051820 | 32116.7 |
| drug/metabolite exporter yeda | C5P43_28710 | Not Available | Positive | 5051993 - 5052537 | 19369.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





