Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase transcriptional activator flha | C5P43_28565 | Not Available | Positive | 5030788 - 5031779 | 36661.6 |
| nitrous oxide-stimulated promoter family protein | C5P43_28570 | Not Available | Negative | 5031816 - 5032169 | 13964.2 |
| is3 family transposase | C5P43_28575 | Not Available | Negative | 5032303 - 5032492 | 7407.7 |
| protein lysine acetyltransferase | C5P43_28580 | Not Available | Negative | 5032493 - 5034193 | 62195.8 |
| acetyltransferase | C5P43_28585 | Not Available | Negative | 5034240 - 5034365 | 4603.58 |
| pts sugar transporter subunit iib | C5P43_28590 | Not Available | Positive | 5034349 - 5034669 | 11427.2 |
| pts n,n'-diacetylchitobiose transporter subunit iic | C5P43_28595 | Not Available | Positive | 5034754 - 5035892 | 40592.7 |
| hypothetical protein | C5P43_28600 | Not Available | Negative | 5035893 - 5036167 | 10347.4 |
| lipid a biosynthesis lauroyltransferase | C5P43_28605 | Not Available | Positive | 5036392 - 5037312 | 35408.9 |
| hypothetical protein | C5P43_28610 | Not Available | Positive | 5037576 - 5038562 | 36993.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





