Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5P43_28500 | Not Available | Negative | 5022166 - 5022560 | 14927.9 |
| oxidative stress defense protein | C5P43_28505 | Not Available | Negative | 5022727 - 5023467 | 26636.7 |
| arginine transporter | C5P43_28510 | Not Available | Negative | 5023560 - 5023898 | 12454.5 |
| peptide-methionine (s)-s-oxide reductase | C5P43_28515 | Not Available | Negative | 5023899 - 5024395 | 18079.3 |
| hypothetical protein | C5P43_28520 | Not Available | Positive | 5024452 - 5024631 | 6769.31 |
| autotransporter assembly complex protein tama | C5P43_28525 | Not Available | Positive | 5024601 - 5025628 | 38319.7 |
| is200/is605 family transposase | C5P43_28530 | Not Available | Positive | 5025629 - 5025796 | 6147.37 |
| duf2686 domain-containing protein | C5P43_28545 | Not Available | Positive | 5026419 - 5027213 | 29788.0 |
| 50s ribosomal protein l9 | C5P43_28550 | Not Available | Negative | 5027284 - 5027357 | 2597.05 |
| abc transporter substrate-binding protein | C5P43_28555 | Not Available | Positive | 5027393 - 5028943 | 58269.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





