Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit beta | C5P43_28240 | Not Available | Positive | 4990431 - 4991243 | 30940.6 |
| ferredoxin | C5P43_28245 | Not Available | Positive | 4991243 - 4991497 | 9293.29 |
| protein inaa | C5P43_28250 | Not Available | Negative | 4991551 - 4992201 | 25297.4 |
| heme abc transporter atp-binding protein | C5P43_28255 | Not Available | Negative | 4992216 - 4992376 | 5466.77 |
| hypothetical protein | C5P43_28260 | Not Available | Negative | 4992373 - 4993440 | 38804.5 |
| hypothetical protein | C5P43_28265 | Not Available | Negative | 4993806 - 4993997 | 7161.71 |
| glutathione s-transferase | C5P43_28270 | Not Available | Positive | 4993998 - 4994399 | 15532.6 |
| hypothetical protein | C5P43_28275 | Not Available | Positive | 4994475 - 4994687 | 8259.59 |
| hypothetical protein | C5P43_28280 | Not Available | Positive | 4995508 - 4995779 | 10157.2 |
| miniconductance mechanosensitive channel mscm | C5P43_28285 | Not Available | Negative | 4995780 - 4997331 | 58737.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





