Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_28190 | Not Available | Positive | 4982539 - 4983248 | 26408.5 |
| protein ydbh | C5P43_28195 | Not Available | Negative | 4983249 - 4984048 | 29513.1 |
| d-lactate dehydrogenase | C5P43_28200 | Not Available | Positive | 4984256 - 4985052 | 29482.7 |
| yeee/yede family protein | C5P43_28205 | Not Available | Positive | 4985053 - 4985591 | 19101.9 |
| hypothetical protein | C5P43_28210 | Not Available | Positive | 4985605 - 4985832 | 8092.61 |
| exodeoxyribonuclease i | C5P43_28215 | Not Available | Negative | 4985875 - 4986848 | 36982.2 |
| hypothetical protein | C5P43_28220 | Not Available | Positive | 4986849 - 4987387 | 19101.9 |
| hypothetical protein | C5P43_28225 | Not Available | Positive | 4987401 - 4987628 | 8092.61 |
| exodeoxyribonuclease i | C5P43_28230 | Not Available | Negative | 4987671 - 4988644 | 37026.3 |
| tn3 family transposase | C5P43_28235 | Not Available | Negative | 4988678 - 4990430 | 65636.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





