Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | C5P43_27880 | Not Available | Positive | 4928228 - 4929181 | 35603.1 |
| hydrogenase-4 component g | C5P43_27885 | Not Available | Negative | 4929182 - 4930283 | 41741.1 |
| hydrogenase | C5P43_27890 | Not Available | Negative | 4930273 - 4931106 | 29518.6 |
| aspartate 1-decarboxylase autocleavage activator panm | C5P43_27895 | Not Available | Negative | 4931107 - 4931168 | 2448.97 |
| branched chain amino acid abc transporter substrate-binding protein | C5P43_27900 | Not Available | Positive | 4931592 - 4932701 | 39380.9 |
| branched-chain amino acid abc transporter permease livh | C5P43_27905 | Not Available | Positive | 4932749 - 4933029 | 10270.9 |
| atp-dependent dna helicase recg | C5P43_27910 | Not Available | Positive | 4933030 - 4934473 | 53060.5 |
| sodium/glutamate symporter | C5P43_27915 | Not Available | Negative | 4934639 - 4934949 | 10924.0 |
| iron-sulfur cluster-binding protein | C5P43_27920 | Not Available | Negative | 4934950 - 4936098 | 42614.5 |
| (fe-s)-binding protein | C5P43_27925 | Not Available | Negative | 4936109 - 4936828 | 26122.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





