Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine export protein mdti | C5P43_27830 | Not Available | Positive | 4920873 - 4921202 | 11720.8 |
| serine protease | C5P43_27835 | Not Available | Negative | 4921241 - 4921477 | 8602.92 |
| flagellar motor switch protein flin | C5P43_27840 | Not Available | Negative | 4921478 - 4921794 | 11200.3 |
| flagellar motor switch protein flim | C5P43_27845 | Not Available | Negative | 4921791 - 4922795 | 37865.5 |
| flagellar basal body-associated protein flil | C5P43_27850 | Not Available | Negative | 4922800 - 4923264 | 17221.8 |
| carbamoyltransferase hypf | C5P43_27855 | Not Available | Negative | 4923405 - 4924933 | 56020.5 |
| formate dehydrogenase | C5P43_27860 | Not Available | Negative | 4925086 - 4925330 | 8726.65 |
| carbamoyltransferase hypf | C5P43_27865 | Not Available | Negative | 4925331 - 4926859 | 56148.6 |
| formate dehydrogenase | C5P43_27870 | Not Available | Negative | 4927012 - 4927256 | 8726.65 |
| rhamnulokinase | C5P43_27875 | Not Available | Positive | 4927257 - 4928231 | 35313.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





