Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_27720 | Not Available | Negative | 4907024 - 4907815 | 29788.5 |
| dna invertase | C5P43_27730 | Not Available | Negative | 4908332 - 4908619 | 11064.9 |
| hypothetical protein | C5P43_27740 | Not Available | Negative | 4908975 - 4909718 | 27885.4 |
| metalloprotease pmba | C5P43_27745 | Not Available | Positive | 4909890 - 4911167 | 45619.0 |
| cytochrome b562 | C5P43_27750 | Not Available | Positive | 4911351 - 4911737 | 14045.8 |
| metalloprotease pmba | C5P43_27755 | Not Available | Positive | 4911837 - 4913114 | 45691.1 |
| cytochrome b562 | C5P43_27760 | Not Available | Positive | 4913297 - 4913683 | 14089.8 |
| acetolactate synthase | C5P43_27765 | Not Available | Positive | 4913760 - 4913954 | 6961.35 |
| acetolactate synthase isozyme 2 small subunit | C5P43_27770 | Not Available | Positive | 4913951 - 4914214 | 9703.74 |
| branched chain amino acid aminotransferase | C5P43_27775 | Not Available | Positive | 4914234 - 4915163 | 34127.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





