Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | C5P43_27620 | Not Available | Positive | 4888639 - 4890126 | 56589.2 |
| flagella biosynthesis regulatory protein flit | C5P43_27625 | Not Available | Positive | 4890196 - 4890543 | 13146.8 |
| alpha-amylase | C5P43_27630 | Not Available | Positive | 4890621 - 4892108 | 56566.1 |
| glucose-6-phosphate dehydrogenase | C5P43_27635 | Not Available | Positive | 4892173 - 4893216 | 39912.3 |
| phosphogluconate dehydratase | C5P43_27640 | Not Available | Positive | 4893451 - 4894146 | 25048.3 |
| hypothetical protein | C5P43_27645 | Not Available | Positive | 4894471 - 4895289 | 31635.3 |
| hypothetical protein | C5P43_27650 | Not Available | Positive | 4895305 - 4895655 | 13345.8 |
| phenylacetyl-coa ligase | C5P43_27655 | Not Available | Positive | 4896121 - 4896247 | 4487.59 |
| phenylacetic acid degradation operon negative regulatory protein paax | C5P43_27660 | Not Available | Positive | 4896348 - 4897298 | 35284.6 |
| phenylacetic acid degradation protein paay | C5P43_27665 | Not Available | Positive | 4897280 - 4897870 | 21441.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





