Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ascorbate-specific phosphotransferase enzyme iib component | C5P43_27405 | Not Available | Negative | 4863761 - 4864066 | 10896.3 |
| xylulose 5-phosphate 3-epimerase | C5P43_27410 | Not Available | Negative | 4864084 - 4864645 | 21409.8 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C5P43_27415 | Not Available | Negative | 4864655 - 4865305 | 23650.4 |
| ascorbate-specific phosphotransferase enzyme iia component | C5P43_27420 | Not Available | Negative | 4865319 - 4865783 | 17226.5 |
| ascorbate-specific phosphotransferase enzyme iib component | C5P43_27425 | Not Available | Negative | 4865793 - 4866098 | 10838.2 |
| transcriptional regulator sdia | C5P43_27430 | Not Available | Negative | 4866116 - 4866660 | 21515.8 |
| l-cystine abc transporter atp-binding protein yecc | C5P43_27435 | Not Available | Negative | 4866890 - 4867642 | 27708.8 |
| amino acid abc transporter permease | C5P43_27440 | Not Available | Negative | 4867639 - 4868146 | 18754.9 |
| duf808 domain-containing protein | C5P43_27445 | Not Available | Positive | 4868147 - 4868264 | 3866.14 |
| duf2158 domain-containing protein | C5P43_27450 | Not Available | Positive | 4868343 - 4868525 | 6678.85 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





