Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose-proton symporter | C5P43_27355 | Not Available | Positive | 4852467 - 4853861 | 50985.6 |
| shikimate transporter | C5P43_27360 | Not Available | Negative | 4853880 - 4855029 | 42106.2 |
| hypothetical protein | C5P43_27365 | Not Available | Positive | 4855344 - 4855926 | 22425.9 |
| shikimate transporter | C5P43_27370 | Not Available | Negative | 4855927 - 4857076 | 42021.1 |
| lps heptosyltransferase | C5P43_27375 | Not Available | Positive | 4857391 - 4857973 | 22325.8 |
| hypothetical protein | C5P43_27380 | Not Available | Positive | 4857974 - 4860013 | 77642.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | C5P43_27385 | Not Available | Negative | 4860014 - 4861817 | 64546.0 |
| xylulose 5-phosphate 3-epimerase | C5P43_27390 | Not Available | Negative | 4862052 - 4862613 | 21437.8 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C5P43_27395 | Not Available | Negative | 4862623 - 4863273 | 23650.4 |
| ascorbate-specific phosphotransferase enzyme iia component | C5P43_27400 | Not Available | Negative | 4863287 - 4863751 | 17223.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





