Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate permease | C5P43_27145 | Not Available | Negative | 4820364 - 4821643 | 45063.2 |
| hypothetical protein | C5P43_27150 | Not Available | Positive | 4821723 - 4822031 | 11764.4 |
| mannonate dehydratase | C5P43_27155 | Not Available | Positive | 4821983 - 4822503 | 19825.3 |
| formate dehydrogenase | C5P43_27160 | Not Available | Negative | 4822504 - 4822913 | 14798.0 |
| laci family dna-binding transcriptional regulator | C5P43_27165 | Not Available | Negative | 4823062 - 4824072 | 36801.3 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | C5P43_27170 | Not Available | Positive | 4824332 - 4824642 | 11069.7 |
| peptide abc transporter permease | C5P43_27175 | Not Available | Positive | 4824784 - 4825803 | 37499.4 |
| peptide abc transporter permease | C5P43_27180 | Not Available | Positive | 4825813 - 4826715 | 32310.5 |
| fad-dependent 2-octaprenylphenol hydroxylase | C5P43_27185 | Not Available | Negative | 4826779 - 4827449 | 24361.0 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | C5P43_27190 | Not Available | Negative | 4827472 - 4828650 | 42312.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





