Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_00925 | Not Available | Negative | 167445 - 167642 | 7620.53 |
| gntr family transcriptional regulator | C5P43_00930 | Not Available | Positive | 167661 - 168413 | 28530.7 |
| adp-ribosylglycohydrolase | C5P43_00935 | Not Available | Positive | 168427 - 169503 | 37862.1 |
| sis domain-containing protein | C5P43_00940 | Not Available | Positive | 169503 - 170501 | 36985.3 |
| carbohydrate kinase family protein | C5P43_00945 | Not Available | Positive | 170506 - 171420 | 32949.6 |
| porin | C5P43_00955 | Not Available | Positive | 172708 - 173403 | 27495.8 |
| duf2608 domain-containing protein | C5P43_00960 | Not Available | Positive | 173417 - 174286 | 32957.9 |
| dna topoisomerase iv subunit b | C5P43_00965 | Not Available | Negative | 174331 - 176223 | 70247.9 |
| esterase yqia | C5P43_00970 | Not Available | Negative | 176252 - 176833 | 21642.7 |
| phosphodiesterase | C5P43_00975 | Not Available | Negative | 176833 - 177660 | 30939.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





