Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonate abc transporter | C5P43_26995 | Not Available | Positive | 4798546 - 4798743 | 7244.91 |
| crispr-associated helicase/endonuclease cas3 | C5P43_27000 | Not Available | Negative | 4798744 - 4800926 | 82459.9 |
| exonuclease | C5P43_27005 | Not Available | Negative | 4800929 - 4802506 | 59540.5 |
| duf1482 domain-containing protein | C5P43_27010 | Not Available | Negative | 4802600 - 4802791 | 6842.35 |
| division inhibition protein dicb | C5P43_27015 | Not Available | Negative | 4802788 - 4802976 | 6964.7 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | C5P43_27020 | Not Available | Positive | 4803157 - 4804224 | 40309.4 |
| imidazole glycerol phosphate synthase subunit hish | C5P43_27025 | Not Available | Positive | 4804224 - 4804814 | 21654.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | C5P43_27030 | Not Available | Positive | 4804814 - 4805294 | 17146.5 |
| hypothetical protein | C5P43_27035 | Not Available | Positive | 4805842 - 4807460 | 59920.8 |
| pts l-ascorbate transporter subunit iib | C5P43_27040 | Not Available | Negative | 4807461 - 4807570 | 3954.94 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





