Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | C5P43_26795 | Not Available | Negative | 4768599 - 4769555 | 34328.5 |
| inorganic pyrophosphatase | C5P43_26800 | Not Available | Positive | 4769865 - 4769933 | 2526.13 |
| rhomboid family intramembrane serine protease | C5P43_26805 | Not Available | Negative | 4769934 - 4771692 | 63036.9 |
| glutamate/aspartate abc transporter substrate-binding protein | C5P43_26810 | Not Available | Positive | 4772072 - 4772177 | 3943.93 |
| rhomboid family intramembrane serine protease | C5P43_26815 | Not Available | Negative | 4772178 - 4772544 | 13359.8 |
| rhomboid family intramembrane serine protease | C5P43_26820 | Not Available | Negative | 4772553 - 4773935 | 49689.2 |
| glutamate/aspartate abc transporter substrate-binding protein | C5P43_26825 | Not Available | Positive | 4774315 - 4774420 | 3943.93 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | C5P43_26830 | Not Available | Positive | 4774421 - 4774711 | 10528.7 |
| adenosylcobinamide-gdp ribazoletransferase | C5P43_26835 | Not Available | Positive | 4774708 - 4775451 | 26397.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | C5P43_26840 | Not Available | Positive | 4775463 - 4776542 | 36938.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





