Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phospho-beta-glucosidase | C5P43_26745 | Not Available | Positive | 4759179 - 4760603 | 53786.6 |
| trna dihydrouridine(20/20a) synthase dusa | C5P43_26750 | Not Available | Positive | 4761188 - 4762225 | 38470.1 |
| envelope stress response protein pspg | C5P43_26755 | Not Available | Positive | 4762359 - 4762601 | 9058.01 |
| quinone oxidoreductase | C5P43_26760 | Not Available | Negative | 4762767 - 4763114 | 12601.9 |
| hypothetical protein | C5P43_26765 | Not Available | Negative | 4763115 - 4763539 | 15669.6 |
| protein-glutamate o-methyltransferase cher | C5P43_26770 | Not Available | Negative | 4763542 - 4764402 | 32864.3 |
| hamp domain-containing protein | C5P43_26775 | Not Available | Negative | 4764421 - 4765422 | 35157.5 |
| choline dehydrogenase | C5P43_26780 | Not Available | Negative | 4765423 - 4766819 | 52121.2 |
| betaine-aldehyde dehydrogenase | C5P43_26785 | Not Available | Negative | 4766833 - 4767684 | 30540.4 |
| sugar abc transporter atp-binding protein | C5P43_26790 | Not Available | Negative | 4767685 - 4768459 | 28973.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





