Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | C5P43_26575 | Not Available | Positive | 4732077 - 4732878 | 29672.2 |
| lipoprotein signal peptidase | C5P43_26580 | Not Available | Positive | 4732878 - 4733372 | 18129.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | C5P43_26585 | Not Available | Positive | 4733460 - 4733909 | 16096.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C5P43_26590 | Not Available | Positive | 4733911 - 4734518 | 22471.9 |
| duf4329 domain-containing protein | C5P43_26595 | Not Available | Positive | 4734519 - 4735133 | 23080.7 |
| hypothetical protein | C5P43_26605 | Not Available | Positive | 4736143 - 4736436 | 10989.3 |
| hypothetical protein | C5P43_26610 | Not Available | Negative | 4736365 - 4736958 | 22514.1 |
| sugar abc transporter atp-binding protein | C5P43_26615 | Not Available | Negative | 4736959 - 4737733 | 29038.4 |
| hypothetical protein | C5P43_26620 | Not Available | Negative | 4737755 - 4737964 | 8039.94 |
| abc transporter substrate-binding protein | C5P43_26625 | Not Available | Negative | 4738043 - 4738999 | 34314.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





