Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | C5P43_26525 | Not Available | Positive | 4722283 - 4723290 | 35657.4 |
| threonine ammonia-lyase, biosynthetic | C5P43_26530 | Not Available | Positive | 4723293 - 4724734 | 52377.2 |
| autoinducer-2 kinase | C5P43_26535 | Not Available | Negative | 4724735 - 4725944 | 43964.9 |
| lsrr family transcriptional regulator | C5P43_26540 | Not Available | Negative | 4726023 - 4726976 | 33816.0 |
| autoinducer-2 kinase | C5P43_26545 | Not Available | Negative | 4727183 - 4728392 | 43994.9 |
| transcriptional regulator lsrr | C5P43_26550 | Not Available | Negative | 4728471 - 4729424 | 33842.1 |
| hypothetical protein | C5P43_26555 | Not Available | Negative | 4729631 - 4729896 | 9514.25 |
| purine permease ygfu | C5P43_26560 | Not Available | Positive | 4730199 - 4730285 | 3132.76 |
| uric acid transporter uact | C5P43_26565 | Not Available | Positive | 4730332 - 4731780 | 51761.4 |
| hypothetical protein | C5P43_26570 | Not Available | Positive | 4731782 - 4731907 | 4791.29 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





