Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase 4 subunit a | C5P43_00875 | Not Available | Negative | 158488 - 160746 | 83836.3 |
| hypothetical protein | C5P43_00880 | Not Available | Negative | 161074 - 161292 | 8332.94 |
| transcriptional regulator | C5P43_00885 | Not Available | Negative | 161292 - 161774 | 17842.2 |
| tigr00156 family protein | C5P43_00890 | Not Available | Negative | 161827 - 162219 | 14011.5 |
| two-component system response regulator qseb | C5P43_00895 | Not Available | Positive | 162371 - 163030 | 24747.2 |
| two-component system sensor histidine kinase qsec | C5P43_00900 | Not Available | Positive | 163027 - 164376 | 50346.8 |
| duf2645 domain-containing protein | C5P43_00905 | Not Available | Negative | 164422 - 164754 | 13194.7 |
| flavodoxin family protein | C5P43_00910 | Not Available | Positive | 165073 - 165654 | 21876.1 |
| quinol monooxygenase ygin | C5P43_00915 | Not Available | Positive | 165685 - 165999 | 11533.1 |
| mfs transporter | C5P43_00920 | Not Available | Negative | 166043 - 167374 | 49527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





