Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_26375 | Not Available | Negative | 4697220 - 4697416 | 7493.97 |
| l-rhamnose mutarotase | C5P43_26380 | Not Available | Positive | 4697417 - 4697673 | 9790.45 |
| pts fructose transporter subunit iia | C5P43_26385 | Not Available | Positive | 4697986 - 4698432 | 16186.6 |
| fructose-like pts system eiibc component | C5P43_26390 | Not Available | Positive | 4698443 - 4699894 | 51123.5 |
| l-rhamnose mutarotase | C5P43_26395 | Not Available | Positive | 4699935 - 4700191 | 9790.45 |
| fructose-like phosphotransferase enzyme iia component | C5P43_26400 | Not Available | Positive | 4700492 - 4700938 | 16094.4 |
| pts subunit iibc | C5P43_26405 | Not Available | Positive | 4700949 - 4702400 | 51132.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | C5P43_26410 | Not Available | Negative | 4702441 - 4704074 | 60152.8 |
| dna replication/repair protein recf | C5P43_26415 | Not Available | Negative | 4704103 - 4704933 | 31494.5 |
| high-affinity branched-chain amino acid abc transporter permease livh | C5P43_26420 | Not Available | Positive | 4704934 - 4705706 | 27146.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





