Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2138 domain-containing protein | C5P43_26270 | Not Available | Positive | 4679086 - 4679637 | 20527.5 |
| hth-type transcriptional regulator cbl | C5P43_26275 | Not Available | Positive | 4679638 - 4680495 | 32255.8 |
| Trna-asn | Not Available | Not Available | Positive | 4680533 - 4680608 | Not Available |
| fmn/fad transporter | C5P43_26285 | Not Available | Positive | 4680769 - 4682195 | 51891.0 |
| hypothetical protein | C5P43_26290 | Not Available | Positive | 4682196 - 4682844 | 23098.2 |
| protein fimf | C5P43_26295 | Not Available | Positive | 4682854 - 4683384 | 18717.3 |
| type 1 fimbrial protein | C5P43_26300 | Not Available | Positive | 4683397 - 4683900 | 17346.3 |
| fimbrial protein | C5P43_26305 | Not Available | Positive | 4683920 - 4684752 | 29169.4 |
| methionine synthase | C5P43_26310 | Not Available | Negative | 4684753 - 4686335 | 57673.9 |
| acetate operon transcriptional repressor iclr | C5P43_26315 | Not Available | Positive | 4686535 - 4687304 | 27920.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





