Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase flrd-nad+ reductase | C5P43_26170 | Not Available | Negative | 4662474 - 4663607 | 41334.1 |
| anaerobic nitric oxide reductase flavorubredoxin | C5P43_26175 | Not Available | Negative | 4663604 - 4664059 | 16672.6 |
| exodeoxyribonuclease 8 | C5P43_26180 | Not Available | Positive | 4664060 - 4665351 | 48225.8 |
| dna recombination protein rect | C5P43_26185 | Not Available | Positive | 4665344 - 4666153 | 29722.8 |
| restriction alleviation and modification enhancement protein | C5P43_26190 | Not Available | Positive | 4666210 - 4666404 | 7019.25 |
| double-strand break reduction protein | C5P43_26195 | Not Available | Positive | 4666397 - 4666606 | 7863.49 |
| abc transporter permease | C5P43_26200 | Not Available | Positive | 4666711 - 4668479 | 65398.4 |
| trna 2-selenouridine(34) synthase mnmh | C5P43_26205 | Not Available | Negative | 4669192 - 4669323 | 5275.39 |
| trehalose-phosphatase | C5P43_26210 | Not Available | Positive | 4669324 - 4669734 | 15154.1 |
| alpha,alpha-trehalose-phosphate synthase | C5P43_26215 | Not Available | Positive | 4669709 - 4671133 | 53556.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





