Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | C5P43_26115 | Not Available | Negative | 4655355 - 4655966 | 22202.5 |
| serine protease | C5P43_26120 | Not Available | Negative | 4655967 - 4656221 | 8848.39 |
| hypothetical protein | C5P43_26125 | Not Available | Negative | 4656321 - 4656404 | 3206.2 |
| acid shock protein | C5P43_26130 | Not Available | Negative | 4656497 - 4656832 | 11524.0 |
| mfs transporter | C5P43_26140 | Not Available | Negative | 4657229 - 4658482 | 45260.2 |
| lysr family transcriptional regulator | C5P43_26145 | Not Available | Positive | 4658589 - 4658683 | 3723.54 |
| aida-i family autotransporter yfal | C5P43_26150 | Not Available | Positive | 4658684 - 4659934 | 45387.7 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | C5P43_26155 | Not Available | Negative | 4660062 - 4660784 | 26587.0 |
| dna gyrase subunit a | C5P43_26160 | Not Available | Positive | 4660931 - 4661397 | 17484.9 |
| carbamoyltransferase hypf | C5P43_26165 | Not Available | Positive | 4661398 - 4662248 | 30168.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





