Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transpeptidase | C5P43_26015 | Not Available | Negative | 4640107 - 4640847 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | C5P43_26020 | Not Available | Negative | 4641003 - 4641281 | 10801.2 |
| type ii toxin-antitoxin system antitoxin dinj | C5P43_26025 | Not Available | Negative | 4641284 - 4641544 | 9392.3 |
| peptidoglycan endopeptidase | C5P43_26030 | Not Available | Positive | 4641754 - 4642157 | 15603.7 |
| carbon-phosphorus lyase complex subunit phni | C5P43_26035 | Not Available | Negative | 4642158 - 4642650 | 17904.3 |
| phosphonate c-p lyase system protein phnh | C5P43_26040 | Not Available | Negative | 4642650 - 4643234 | 20928.5 |
| phosphonate c-p lyase system protein phng | C5P43_26045 | Not Available | Negative | 4643231 - 4643683 | 16565.7 |
| phosphonate metabolism transcriptional regulator phnf | C5P43_26050 | Not Available | Negative | 4643684 - 4644409 | 27650.1 |
| phosphonate abc transporter, permease protein phne | C5P43_26055 | Not Available | Negative | 4644430 - 4644960 | 19269.2 |
| hypothetical protein | C5P43_26060 | Not Available | Positive | 4644961 - 4645203 | 8394.79 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





