Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat family protein | C5P43_25965 | Not Available | Negative | 4630830 - 4630960 | 5047.35 |
| duf1266 domain-containing protein | C5P43_25970 | Not Available | Positive | 4631061 - 4631768 | 26952.7 |
| molecular chaperone dnaj | C5P43_25975 | Not Available | Positive | 4631765 - 4633216 | 55668.1 |
| molecular chaperone hscc | C5P43_25980 | Not Available | Negative | 4633276 - 4633677 | 15147.0 |
| universal stress protein uspf | C5P43_25985 | Not Available | Negative | 4633767 - 4634201 | 15977.4 |
| phosphoporin phoe | C5P43_25990 | Not Available | Negative | 4634342 - 4635475 | 41207.9 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C5P43_25995 | Not Available | Negative | 4635841 - 4636521 | 24982.6 |
| non-ribosomal peptide synthetase | C5P43_26000 | Not Available | Positive | 4636522 - 4638661 | 77444.5 |
| lps o-antigen length regulator | C5P43_26005 | Not Available | Positive | 4638877 - 4639342 | 17582.5 |
| class ii glutamine amidotransferase | C5P43_26010 | Not Available | Positive | 4639369 - 4640136 | 28637.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





