Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgk | C5P43_25710 | Not Available | Negative | 4588939 - 4589650 | 25060.8 |
| aspartate--trna ligase | C5P43_25715 | Not Available | Negative | 4589651 - 4591305 | 61828.3 |
| hydrolase | C5P43_25720 | Not Available | Positive | 4591615 - 4592181 | 20450.3 |
| duf72 domain-containing protein | C5P43_25725 | Not Available | Positive | 4592178 - 4592656 | 18610.3 |
| phoh family protein | C5P43_25730 | Not Available | Positive | 4592776 - 4593855 | 40656.9 |
| endoribonuclease ybey | C5P43_25735 | Not Available | Positive | 4593852 - 4594319 | 17526.6 |
| magnesium and cobalt efflux protein corc | C5P43_25740 | Not Available | Positive | 4594409 - 4595287 | 33300.4 |
| apolipoprotein n-acyltransferase | C5P43_25745 | Not Available | Positive | 4595312 - 4595652 | 12282.4 |
| hypothetical protein | C5P43_25750 | Not Available | Negative | 4595653 - 4596602 | 33600.7 |
| methionine synthase | C5P43_25755 | Not Available | Negative | 4596822 - 4598630 | 67630.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





