Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | C5P43_25545 | Not Available | Negative | 4565252 - 4566147 | 33704.8 |
| duf2655 domain-containing protein | C5P43_25550 | Not Available | Negative | 4566265 - 4566585 | 12100.6 |
| ribonuclease e | C5P43_25555 | Not Available | Positive | 4566720 - 4568368 | 61541.6 |
| signal recognition particle-docking protein ftsy | C5P43_25560 | Not Available | Negative | 4568369 - 4569057 | 25470.1 |
| ribosomal rna small subunit methyltransferase d | C5P43_25565 | Not Available | Positive | 4569207 - 4569803 | 21678.8 |
| duf1145 domain-containing protein | C5P43_25570 | Not Available | Positive | 4569793 - 4570062 | 10280.4 |
| duf2500 domain-containing protein | C5P43_25575 | Not Available | Negative | 4570065 - 4570424 | 13543.4 |
| lysoplasmalogenase | C5P43_25580 | Not Available | Positive | 4570565 - 4571191 | 23791.9 |
| hypothetical protein | C5P43_25585 | Not Available | Positive | 4571265 - 4571470 | 7230.4 |
| sdr family oxidoreductase | C5P43_25590 | Not Available | Negative | 4571471 - 4572058 | 20838.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





