Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flgb | C5P43_25495 | Not Available | Negative | 4559634 - 4560050 | 15241.1 |
| flagellar basal body p-ring formation protein flga | C5P43_25500 | Not Available | Positive | 4560205 - 4560864 | 23536.5 |
| anti-sigma-28 factor flgm | C5P43_25505 | Not Available | Positive | 4560940 - 4561233 | 10341.2 |
| flagella biosynthesis chaperone flgn | C5P43_25510 | Not Available | Positive | 4561238 - 4561654 | 15823.9 |
| lipid ii flippase murj | C5P43_25515 | Not Available | Negative | 4561694 - 4562122 | 15663.2 |
| hypothetical protein | C5P43_25520 | Not Available | Negative | 4562123 - 4562390 | 10160.4 |
| hypothetical protein | C5P43_25525 | Not Available | Positive | 4562920 - 4563192 | 10546.7 |
| 23s rrna pseudouridine(2604) synthase rluf | C5P43_25530 | Not Available | Negative | 4563193 - 4564065 | 32434.4 |
| peptidase e | C5P43_25535 | Not Available | Positive | 4564277 - 4564966 | 24571.7 |
| hypothetical protein | C5P43_25540 | Not Available | Negative | 4565057 - 4565251 | 7488.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





