Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-1 | C5P43_25395 | Not Available | Positive | 4546639 - 4547346 | 26710.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C5P43_25400 | Not Available | Positive | 4547426 - 4548157 | 26979.7 |
| glutathione synthetase | C5P43_25405 | Not Available | Positive | 4548170 - 4549120 | 35563.0 |
| hypothetical protein | C5P43_25410 | Not Available | Positive | 4549229 - 4549500 | 10250.7 |
| is6 family transposase | C5P43_25415 | Not Available | Negative | 4549501 - 4549582 | 3489.39 |
| hypothetical protein | C5P43_25420 | Not Available | Positive | 4549555 - 4549743 | 6870.16 |
| glutathione synthase | C5P43_25425 | Not Available | Positive | 4549831 - 4551267 | 53284.4 |
| hypothetical protein | C5P43_25430 | Not Available | Negative | 4551565 - 4551816 | 9014.75 |
| repb family plasmid replication initiator protein | C5P43_25435 | Not Available | Negative | 4551861 - 4552565 | 26857.0 |
| is6 family transposase | C5P43_25440 | Not Available | Negative | 4552595 - 4552669 | 2724.26 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





