Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin | C5P43_25285 | Not Available | Positive | 4526595 - 4527010 | 15522.5 |
| mipa/ompv family protein | C5P43_25290 | Not Available | Negative | 4527011 - 4527724 | 26436.8 |
| lysr family transcriptional regulator | C5P43_25295 | Not Available | Positive | 4527848 - 4528822 | 37276.5 |
| hypothetical protein | C5P43_25300 | Not Available | Negative | 4528819 - 4529955 | 41773.5 |
| hypothetical protein | C5P43_25305 | Not Available | Negative | 4529961 - 4530272 | 11897.6 |
| hypothetical protein | C5P43_25320 | Not Available | Negative | 4532956 - 4533514 | 19373.2 |
| Trna-asp | Not Available | Not Available | Positive | 4533564 - 4533640 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 4533649 - 4533724 | Not Available |
| transcriptional regulator | C5P43_25335 | Not Available | Negative | 4533820 - 4534659 | 31778.0 |
| duf413 domain-containing protein | C5P43_25340 | Not Available | Positive | 4534778 - 4535116 | 13134.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





