Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar transcriptional regulator flhd | C5P43_25235 | Not Available | Positive | 4517140 - 4517420 | 10449.6 |
| flagellar transcriptional regulator flhc | C5P43_25240 | Not Available | Positive | 4517423 - 4518001 | 21568.3 |
| flagellar motor stator protein mota | C5P43_25245 | Not Available | Positive | 4518128 - 4519015 | 31941.3 |
| motility protein b | C5P43_25250 | Not Available | Positive | 4519012 - 4519938 | 34188.1 |
| chemotaxis protein chea | C5P43_25255 | Not Available | Positive | 4519943 - 4520451 | 19082.5 |
| xaa-pro dipeptidase | C5P43_25260 | Not Available | Positive | 4520452 - 4520907 | 17305.9 |
| yigz family protein | C5P43_25265 | Not Available | Positive | 4520907 - 4521521 | 21708.1 |
| trk system potassium uptake protein trkh | C5P43_25270 | Not Available | Positive | 4521560 - 4523011 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C5P43_25275 | Not Available | Positive | 4523023 - 4523568 | 21238.4 |
| exodeoxyribonuclease v subunit gamma | C5P43_25280 | Not Available | Positive | 4523732 - 4526419 | 102442.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





