Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane assembly protein asma | C5P43_25185 | Not Available | Positive | 4507084 - 4507656 | 21606.5 |
| terc family protein | C5P43_25190 | Not Available | Negative | 4507930 - 4509513 | 59439.9 |
| polysaccharide export protein wza | C5P43_25195 | Not Available | Positive | 4510172 - 4510440 | 10070.5 |
| iron-hydroxamate transporter atp-binding subunit | C5P43_25200 | Not Available | Negative | 4510441 - 4510788 | 12747.4 |
| ferrichrome porin fhua | C5P43_25205 | Not Available | Negative | 4510839 - 4513082 | 82167.4 |
| bifunctional glycosyl transferase/transpeptidase | C5P43_25210 | Not Available | Negative | 4513302 - 4513796 | 17811.5 |
| hypothetical protein | C5P43_25215 | Not Available | Negative | 4513797 - 4514710 | 34381.7 |
| uridine kinase | C5P43_25220 | Not Available | Positive | 4515028 - 4515669 | 24354.6 |
| dctp deaminase | C5P43_25225 | Not Available | Positive | 4515761 - 4516342 | 21222.4 |
| outer membrane assembly protein asma | C5P43_25230 | Not Available | Positive | 4516364 - 4517139 | 29018.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





