Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3343 domain-containing protein | C5P43_25085 | Not Available | Negative | 4488536 - 4488793 | 9655.84 |
| hypothetical protein | C5P43_25090 | Not Available | Negative | 4488790 - 4489557 | 27188.7 |
| hypothetical protein | C5P43_25095 | Not Available | Negative | 4489567 - 4489842 | 10203.2 |
| colanic acid biosynthesis acetyltransferase wcab | C5P43_25100 | Not Available | Negative | 4489843 - 4490239 | 14613.8 |
| colanic acid biosynthesis glycosyltransferase wcaa | C5P43_25105 | Not Available | Negative | 4490242 - 4491081 | 33037.5 |
| tyrosine-protein kinase wzc | C5P43_25110 | Not Available | Negative | 4491174 - 4493336 | 79327.7 |
| ornithine decarboxylase | C5P43_25115 | Not Available | Positive | 4493348 - 4495024 | 62511.5 |
| nucleoside permease nupg | C5P43_25120 | Not Available | Negative | 4495074 - 4496330 | 46392.0 |
| murein transglycosylase c | C5P43_25125 | Not Available | Negative | 4496532 - 4496838 | 11256.3 |
| nupc/nupg family nucleoside cnt transporter | C5P43_25130 | Not Available | Negative | 4496839 - 4497793 | 33483.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





