Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_25020 | Not Available | Negative | 4478694 - 4479296 | 22356.5 |
| duf2544 domain-containing protein | C5P43_25025 | Not Available | Negative | 4479457 - 4480314 | 31060.7 |
| fimbrial protein | C5P43_25030 | Not Available | Negative | 4480316 - 4480840 | 18259.6 |
| fimbrial protein | C5P43_25035 | Not Available | Negative | 4480837 - 4481307 | 17021.2 |
| fimbrial protein | C5P43_25040 | Not Available | Negative | 4481304 - 4481918 | 21320.8 |
| fimbrial protein | C5P43_25045 | Not Available | Negative | 4481827 - 4482579 | 27679.3 |
| hypothetical protein | C5P43_25050 | Not Available | Negative | 4482599 - 4482828 | 8047.6 |
| hypothetical protein | C5P43_25065 | Not Available | Positive | 4485461 - 4485853 | 14561.9 |
| mfs transporter | C5P43_25075 | Not Available | Negative | 4486365 - 4487543 | 41259.1 |
| hypothetical protein | C5P43_25080 | Not Available | Negative | 4487611 - 4488471 | 31940.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





