Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copd | C5P43_24970 | Not Available | Positive | 4468093 - 4468640 | 20547.0 |
| hypothetical protein | C5P43_24975 | Not Available | Negative | 4468641 - 4470061 | 53112.8 |
| c4-dicarboxylate abc transporter | C5P43_24980 | Not Available | Negative | 4470282 - 4471568 | 45439.2 |
| transcriptional regulator | C5P43_24985 | Not Available | Positive | 4471494 - 4471670 | 6643.08 |
| biofilm formation regulator hmsp | C5P43_24990 | Not Available | Negative | 4471751 - 4472206 | 16851.7 |
| undecaprenyl-phosphate glucose phosphotransferase | C5P43_24995 | Not Available | Negative | 4472207 - 4473278 | 39901.4 |
| phosphomannomutase cpsg | C5P43_25000 | Not Available | Negative | 4473333 - 4474703 | 50420.5 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | C5P43_25005 | Not Available | Negative | 4474805 - 4475757 | 35317.4 |
| flavohemoprotein | C5P43_25010 | Not Available | Negative | 4475859 - 4477049 | 43870.1 |
| serine hydroxymethyltransferase | C5P43_25015 | Not Available | Positive | 4477377 - 4478630 | 45319.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





