Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C5P43_00725 | Not Available | Negative | 131019 - 131501 | 18772.5 |
| conjugal transfer protein trab | C5P43_00730 | Not Available | Negative | 131509 - 132864 | 48515.8 |
| hypothetical protein | C5P43_00735 | Not Available | Negative | 132854 - 133315 | 17207.4 |
| trhk | C5P43_00740 | Not Available | Negative | 133317 - 134588 | 45264.5 |
| pilus assembly protein | C5P43_00745 | Not Available | Negative | 134588 - 135376 | 29314.2 |
| plasmid transfer protein | C5P43_00750 | Not Available | Negative | 135388 - 135705 | 12257.1 |
| hydrogenase 2 maturation endopeptidase | C5P43_00755 | Not Available | Negative | 135858 - 136057 | 7149.84 |
| hydrogenase-2 large chain | C5P43_00760 | Not Available | Negative | 136057 - 137760 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | C5P43_00765 | Not Available | Negative | 137757 - 138935 | 43604.7 |
| hydrogenase-2 operon protein hyba | C5P43_00770 | Not Available | Negative | 138925 - 139911 | 36005.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





