Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase (quinone) | C5P43_24865 | Not Available | Positive | 4453121 - 4453717 | 20846.8 |
| hypothetical protein | C5P43_24870 | Not Available | Positive | 4453738 - 4453965 | 8524.89 |
| glucose-1-phosphatase | C5P43_24875 | Not Available | Negative | 4454003 - 4454299 | 11067.1 |
| endonuclease smrb | C5P43_24880 | Not Available | Positive | 4454300 - 4454426 | 4643.62 |
| duf2544 domain-containing protein | C5P43_24885 | Not Available | Negative | 4454499 - 4455350 | 31050.8 |
| fimbrial protein | C5P43_24890 | Not Available | Negative | 4455352 - 4455891 | 18875.3 |
| fimbrial protein | C5P43_24895 | Not Available | Negative | 4455888 - 4456376 | 17733.8 |
| hypothetical protein | C5P43_24900 | Not Available | Negative | 4456373 - 4456882 | 17908.5 |
| fimbrial protein | C5P43_24905 | Not Available | Negative | 4456898 - 4457650 | 27694.4 |
| hypothetical protein | C5P43_24910 | Not Available | Negative | 4457670 - 4457899 | 8036.62 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





