Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter | C5P43_24715 | Not Available | Positive | 4428752 - 4428988 | 9181.31 |
| duf2138 domain-containing protein | C5P43_24720 | Not Available | Positive | 4428989 - 4429253 | 9812.15 |
| duf1175 domain-containing protein | C5P43_24725 | Not Available | Positive | 4429250 - 4429873 | 23730.5 |
| hypothetical protein | C5P43_24730 | Not Available | Positive | 4429807 - 4432614 | 103879.0 |
| lysr family transcriptional regulator | C5P43_24735 | Not Available | Negative | 4432615 - 4433516 | 34512.4 |
| beta-aspartyl-peptidase | C5P43_24740 | Not Available | Negative | 4433581 - 4434753 | 41172.4 |
| hypothetical protein | C5P43_24745 | Not Available | Negative | 4434766 - 4435227 | 16194.5 |
| hypothetical protein | C5P43_24750 | Not Available | Negative | 4435224 - 4435907 | 23794.8 |
| hypothetical protein | C5P43_24755 | Not Available | Positive | 4435937 - 4436128 | 7330.33 |
| rna 2'-phosphotransferase | C5P43_24760 | Not Available | Positive | 4436157 - 4436236 | 3053.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





