Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar p-ring protein | C5P43_24665 | Not Available | Negative | 4419700 - 4420797 | 38171.9 |
| flagellar l-ring protein | C5P43_24670 | Not Available | Negative | 4420809 - 4421507 | 24616.9 |
| hypothetical protein | C5P43_24675 | Not Available | Negative | 4421560 - 4421712 | 5603.7 |
| undecaprenyl-phosphate glucose phosphotransferase | C5P43_24680 | Not Available | Negative | 4421713 - 4422784 | 39917.4 |
| phosphomannomutase cpsg | C5P43_24685 | Not Available | Negative | 4422839 - 4424209 | 50407.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | C5P43_24690 | Not Available | Negative | 4424402 - 4425354 | 35303.4 |
| betaine-aldehyde dehydrogenase | C5P43_24695 | Not Available | Negative | 4425355 - 4425482 | 4571.36 |
| transcriptional regulator | C5P43_24700 | Not Available | Negative | 4425496 - 4426083 | 21791.4 |
| hypothetical protein | C5P43_24705 | Not Available | Positive | 4426000 - 4426215 | 8064.71 |
| choline transporter | C5P43_24710 | Not Available | Positive | 4426212 - 4428245 | 75846.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





