Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease subunit cysw | C5P43_24610 | Not Available | Negative | 4411021 - 4411896 | 32525.6 |
| sulfate abc transporter permease | C5P43_24615 | Not Available | Negative | 4411896 - 4412729 | 30293.6 |
| sulfate abc transporter substrate-binding protein | C5P43_24620 | Not Available | Negative | 4412729 - 4413745 | 37660.6 |
| nad(p)-dependent oxidoreductase | C5P43_24625 | Not Available | Negative | 4413903 - 4414372 | 16406.8 |
| glucose-6-phosphate isomerase | C5P43_24630 | Not Available | Negative | 4414373 - 4414839 | 17387.8 |
| lysine-sensitive aspartokinase 3 | C5P43_24640 | Not Available | Positive | 4415364 - 4416713 | 48566.6 |
| zeta toxin | C5P43_24645 | Not Available | Positive | 4416858 - 4417784 | 34499.5 |
| nucleotidyltransferase | C5P43_24650 | Not Available | Negative | 4417820 - 4418052 | 8598.33 |
| flagellar hook-associated protein flgk | C5P43_24655 | Not Available | Negative | 4418053 - 4418693 | 22828.6 |
| flagellar assembly peptidoglycan hydrolase flgj | C5P43_24660 | Not Available | Negative | 4418759 - 4419700 | 34477.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





