Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1107 domain-containing protein | C5P43_24560 | Not Available | Positive | 4401418 - 4401624 | 8072.24 |
| hlyc/corc family transporter | C5P43_24565 | Not Available | Negative | 4401686 - 4403029 | 49811.7 |
| 2-methylcitrate synthase | C5P43_24570 | Not Available | Positive | 4403164 - 4403871 | 26504.5 |
| 2-methylcitrate dehydratase | C5P43_24575 | Not Available | Positive | 4403905 - 4405356 | 53984.8 |
| propionate--coa ligase | C5P43_24580 | Not Available | Positive | 4405396 - 4406906 | 55904.8 |
| gluconate transporter | C5P43_24585 | Not Available | Positive | 4406907 - 4407033 | 4465.57 |
| recq family atp-dependent dna helicase | C5P43_24590 | Not Available | Positive | 4407173 - 4409269 | 77523.3 |
| dna-processing protein dpra | C5P43_24595 | Not Available | Positive | 4409269 - 4410471 | 43780.6 |
| antibiotic transporter | C5P43_24600 | Not Available | Negative | 4410517 - 4410643 | 4685.18 |
| sulfate abc transporter atp-binding protein | C5P43_24605 | Not Available | Negative | 4410644 - 4411031 | 14312.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





