Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmannosamine kinase | C5P43_24505 | Not Available | Negative | 4391892 - 4392214 | 11247.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | C5P43_24510 | Not Available | Negative | 4392211 - 4392900 | 24075.0 |
| mfs transporter | C5P43_24515 | Not Available | Negative | 4392948 - 4394438 | 53610.4 |
| n-acetylneuraminate lyase | C5P43_24520 | Not Available | Negative | 4394547 - 4395440 | 32595.4 |
| transcriptional regulator nanr | C5P43_24525 | Not Available | Negative | 4395562 - 4395657 | 3453.88 |
| ribonucleoside-diphosphate reductase subunit alpha | C5P43_24530 | Not Available | Negative | 4395658 - 4397099 | 54542.1 |
| aida-i family autotransporter yfal | C5P43_24540 | Not Available | Positive | 4397795 - 4399419 | 55967.8 |
| hypothetical protein | C5P43_24545 | Not Available | Negative | 4399420 - 4399616 | 7330.79 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C5P43_24550 | Not Available | Positive | 4399806 - 4400546 | 27179.3 |
| ytfj family protein | C5P43_24555 | Not Available | Negative | 4400536 - 4401093 | 20617.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





