Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | C5P43_24455 | Not Available | Negative | 4384342 - 4384887 | 20226.1 |
| lysr family transcriptional regulator | C5P43_24460 | Not Available | Positive | 4385009 - 4385944 | 34452.8 |
| aspartate/glutamate racemase | C5P43_24465 | Not Available | Negative | 4385931 - 4386623 | 25309.5 |
| arabinose:proton symporter | C5P43_24470 | Not Available | Negative | 4386752 - 4388122 | 49916.4 |
| sodium:alanine symporter family protein | C5P43_24475 | Not Available | Negative | 4388123 - 4388370 | 9089.09 |
| transaldolase | C5P43_24480 | Not Available | Positive | 4388649 - 4389602 | 35207.1 |
| molybdopterin adenylyltransferase | C5P43_24485 | Not Available | Positive | 4389717 - 4390304 | 21165.6 |
| hypothetical protein | C5P43_24490 | Not Available | Negative | 4390339 - 4390905 | 20102.2 |
| hypothetical protein | C5P43_24495 | Not Available | Negative | 4391054 - 4391767 | 26666.5 |
| duf2541 domain-containing protein | C5P43_24500 | Not Available | Negative | 4391793 - 4391891 | 3483.02 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





