Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis glycosyltransferase wcal | C5P43_24190 | Not Available | Negative | 4335404 - 4336624 | 45395.4 |
| colanic acid biosynthesis pyruvyl transferase wcak | C5P43_24195 | Not Available | Negative | 4336621 - 4337828 | 44658.1 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | C5P43_24200 | Not Available | Negative | 4337829 - 4337944 | 4498.43 |
| duf1471 domain-containing protein | C5P43_24205 | Not Available | Positive | 4338076 - 4338480 | 14636.7 |
| catecholate siderophore receptor fiu | C5P43_24210 | Not Available | Positive | 4338744 - 4341026 | 81960.5 |
| pkhd-type hydroxylase | C5P43_24215 | Not Available | Positive | 4341068 - 4341745 | 25530.2 |
| hypothetical protein | C5P43_24225 | Not Available | Negative | 4343153 - 4343635 | 18982.9 |
| hypothetical protein | C5P43_24235 | Not Available | Negative | 4345847 - 4346026 | 6434.5 |
| damage inducible protein | C5P43_24240 | Not Available | Positive | 4346048 - 4346131 | 3021.06 |
| glutathione-disulfide reductase | C5P43_24245 | Not Available | Negative | 4346185 - 4347537 | 48745.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





