Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase | C5P43_24140 | Not Available | Negative | 4325454 - 4325846 | 14133.7 |
| 2-keto-4-pentenoate hydratase | C5P43_24145 | Not Available | Positive | 4325976 - 4326362 | 13255.8 |
| acetaldehyde dehydrogenase | C5P43_24150 | Not Available | Positive | 4326359 - 4327309 | 33444.5 |
| 4-hydroxy-2-oxovalerate aldolase | C5P43_24155 | Not Available | Positive | 4327306 - 4328319 | 36472.6 |
| 3-(3-hydroxy-phenyl)propionate transporter | C5P43_24160 | Not Available | Positive | 4328495 - 4329706 | 41555.4 |
| duf2058 domain-containing protein | C5P43_24165 | Not Available | Positive | 4329808 - 4329926 | 4409.52 |
| colanic acid biosynthesis protein wcam | C5P43_24170 | Not Available | Negative | 4330048 - 4331442 | 51235.9 |
| colanic acid biosynthesis glycosyltransferase wcal | C5P43_24175 | Not Available | Negative | 4331453 - 4332673 | 45343.3 |
| colanic acid biosynthesis pyruvyl transferase wcak | C5P43_24180 | Not Available | Negative | 4332670 - 4333877 | 44537.0 |
| colanic acid biosynthesis protein wcam | C5P43_24185 | Not Available | Negative | 4333999 - 4335393 | 51173.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





