Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | C5P43_24090 | Not Available | Negative | 4315607 - 4316350 | 25940.1 |
| glycine dehydrogenase (aminomethyl-transferring) | C5P43_24095 | Not Available | Negative | 4316611 - 4318059 | 52768.4 |
| glutathione-dependent disulfide-bond oxidoreductase | C5P43_24100 | Not Available | Negative | 4318293 - 4319159 | 32424.5 |
| bifunctional glutathionylspermidine amidase/glutathionylspermidine synthase | C5P43_24105 | Not Available | Positive | 4319364 - 4321223 | 70535.8 |
| hypothetical protein | C5P43_24110 | Not Available | Negative | 4321315 - 4321578 | 10371.0 |
| hypothetical protein | C5P43_24115 | Not Available | Positive | 4321515 - 4322019 | 17867.5 |
| relaxase | C5P43_24120 | Not Available | Positive | 4322171 - 4322413 | 8907.68 |
| tetr family transcriptional regulator | C5P43_24125 | Not Available | Negative | 4322445 - 4323122 | 24316.8 |
| tetracycline efflux mfs transporter tet(a) | C5P43_24130 | Not Available | Positive | 4323201 - 4324400 | 42243.5 |
| eama family transporter | C5P43_24135 | Not Available | Negative | 4324432 - 4325316 | 31150.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





