Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | C5P43_23935 | Not Available | Positive | 4291225 - 4292004 | 27946.9 |
| lipid kinase yegs | C5P43_23940 | Not Available | Negative | 4292086 - 4292985 | 31989.6 |
| hypothetical protein | C5P43_23945 | Not Available | Positive | 4293400 - 4293717 | 11393.8 |
| hypothetical protein | C5P43_23950 | Not Available | Positive | 4293705 - 4293854 | 5730.12 |
| metalloprotease pmba | C5P43_23955 | Not Available | Negative | 4293903 - 4294081 | 6183.36 |
| ribosome-associated protein | C5P43_23960 | Not Available | Positive | 4294175 - 4294726 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | C5P43_23965 | Not Available | Negative | 4294877 - 4296250 | 49912.1 |
| fructose 1,6-bisphosphatase | C5P43_23970 | Not Available | Positive | 4296426 - 4297424 | 36836.0 |
| sugar abc transporter permease yjff | C5P43_23975 | Not Available | Negative | 4297457 - 4298019 | 19586.2 |
| 2,3-dehydroadipyl-coa hydratase | C5P43_23980 | Not Available | Negative | 4298020 - 4298291 | 9737.66 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





