Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | C5P43_00625 | Not Available | Negative | 107068 - 108579 | 56458.1 |
| signal peptidase i | C5P43_00630 | Not Available | Negative | 108566 - 109078 | 19397.9 |
| hypothetical protein | C5P43_00635 | Not Available | Negative | 109356 - 113660 | 158524.0 |
| plasmid transfer protein | C5P43_00640 | Not Available | Negative | 113780 - 114334 | 20520.8 |
| htdf | C5P43_00645 | Not Available | Negative | 114343 - 114768 | 15623.9 |
| transfer repressor | C5P43_00650 | Not Available | Negative | 114758 - 115210 | 16560.2 |
| hypothetical protein | C5P43_00655 | Not Available | Negative | 115614 - 116252 | 23618.1 |
| stba family protein | C5P43_00660 | Not Available | Negative | 116264 - 117301 | 38540.6 |
| hypothetical protein | C5P43_00665 | Not Available | Positive | 117665 - 118612 | 35612.2 |
| hypothetical protein | C5P43_00670 | Not Available | Positive | 118609 - 119445 | 31311.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





