Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate methyltransferase | C5P43_23880 | Not Available | Positive | 4281249 - 4281519 | 9923.71 |
| hypothetical protein | C5P43_23885 | Not Available | Negative | 4281520 - 4281680 | 6634.1 |
| fusc family protein | C5P43_23890 | Not Available | Negative | 4281852 - 4282910 | 39956.7 |
| dna gyrase inhibitor sbmc | C5P43_23895 | Not Available | Negative | 4283108 - 4283581 | 18082.4 |
| serine-type d-ala-d-ala carboxypeptidase dacd | C5P43_23900 | Not Available | Negative | 4283700 - 4284866 | 43362.5 |
| exodeoxyribonuclease i | C5P43_23905 | Not Available | Positive | 4285075 - 4285655 | 22115.7 |
| hypothetical protein | C5P43_23910 | Not Available | Positive | 4286331 - 4288070 | 67563.8 |
| integrase | C5P43_23915 | Not Available | Negative | 4288209 - 4289450 | 46734.4 |
| pts galactitol transporter subunit iic | C5P43_23925 | Not Available | Positive | 4289782 - 4290036 | 9070.3 |
| galactitol-1-phosphate 5-dehydrogenase | C5P43_23930 | Not Available | Positive | 4290085 - 4291125 | 37392.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





