Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | C5P43_23645 | Not Available | Positive | 4246928 - 4247682 | 27088.7 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C5P43_23650 | Not Available | Negative | 4247683 - 4248706 | 36305.4 |
| fad-binding oxidoreductase | C5P43_23655 | Not Available | Negative | 4248744 - 4250024 | 47165.2 |
| aldehyde dehydrogenase puuc | C5P43_23660 | Not Available | Negative | 4250026 - 4251513 | 53301.3 |
| transcriptional regulator | C5P43_23665 | Not Available | Negative | 4251678 - 4251964 | 10113.0 |
| hypothetical protein | C5P43_23670 | Not Available | Positive | 4251965 - 4252161 | 8004.51 |
| duf968 domain-containing protein | C5P43_23675 | Not Available | Positive | 4252163 - 4253212 | 39225.4 |
| antitermination protein q | C5P43_23680 | Not Available | Positive | 4253226 - 4253978 | 27927.8 |
| cold-shock protein cspf | C5P43_23685 | Not Available | Negative | 4254400 - 4254612 | 7563.18 |
| cold-shock protein cspb | C5P43_23690 | Not Available | Positive | 4254913 - 4255128 | 7717.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





